Angiogenesis as an independent prognostic indicator in node-negative breast cancer

OBJECTIVE: To quantitate tumor angiogenesis in carcinoma of the breast (stage T2N0M0) by computerized image analysis of CD-31-stained histologic sections and, keeping in view the heterogeneity of tumors, to assess which areas of neovascularization provide the best prognostic indicator. STUDY DESIGN: Thirty-six cases of infiltrating duct carcinoma of the breast, stage T2N0M0, with follow-up of five years, were analyzed. All cases had received uniform initial treatment in the form of mastectomy with axillary clearance and radiotherapy. Intratumoral microvessel density (IMD) counts were done on "hot spots" and "non-hot spots" on CD-31-stained sections using computerized image analysis. Angiogenesis was correlated with other variables, such as age, menopausal status, histologic grade and proliferative activity by univariate and multivariate analyses. RESULTS: Hot-spot IMD counts were highly significant independent prognostic markers in univariate and multivariate analyses. Background vascularity of a tumor was of no value in prognosticating. CONCLUSION: In patients with node negative breast carcinoma, IMD counts in hot spots are an independent prognostic factor in disease-free and overall survival and can be used to separate out patients with T2N0M0 stage in need of systemic adjuvant therapy.     

新疆生态用水量的初步估算

以新疆为例 ,在干旱区生态用水的概念与分类基础上 ,依据部分试验资料及理论公式推导结果 ,确定了各类生态用水的用水定额 ,并以林业、草场资源等统计数据为依据 ,对新疆 1 995年的生态用水进行了初步估算。结果表明 ,全疆生态用水总量达 2 3 7.9× 1 0 8m3。其地区分布情况是北疆占 1 7.8%,东疆占 5.4 %,南疆占 76.8%。就其类型而言 ,天然植被生态用水量最大 ,其中又以低地草甸为最大     

鄂尔多斯高原北缘水分梯度下天然植被分布格局初探

以鄂尔多斯高原杭锦旗北部独贵塔拉镇的过渡带为研究对象,通过样线调查,研究了水分梯度下天然植被的空间分布规律.TWINSPAN的分类结果表明,群落以中生和旱生为主,一些耐盐的植物散布其中;相邻样方间相似性指数的变化反映了不同类型群落在研究区内的镶嵌分布,从而形成了该区域内群落的多样性和复杂性.对植被样方与地形地貌因子的CCA排序结果显示,植被群落空间格局的形成更多地取决于区域内的水分变化梯度.在本文的研究尺度上,这种水分变化梯度主要由微地形地貌的变化来决定,而不是由与黄河的距离因子来决定.因此,在本区域的土地开发利用过程中,应充分考虑目前已经形成的相对稳定的地形地貌单元特点,在缺乏完善的风沙防护措施和排水除盐措施的情况下,不宜采取大规模平整土地进行综合开发.     

巢湖蓝藻与农业废弃物共热解制取生物质油研究

采用蔗渣、玉米秸秆和棉花秸秆3种废弃物与蓝藻进行混合共热解试验,考察废弃物的加入对蓝藻热解液体产率及组分的影响。结果表明:添加3种废弃物均使共热解液体产率呈下降趋势。当蓝藻与废弃物以1∶1混合共热解时,以蓝藻和玉米秸秆共热解液体产率最高,为61.8%,且除苯酚类以外,液体产物组分与单一蓝藻热解产物组分相近,含氮化合物含量明显降低,相对含量由18.49%降至8.15%。与其它2种废弃物相比,蓝藻与玉米秸秆在适当比例下的共热解有利于改善热解油品质。     

Bfl-1/A1 acts as a negative regulator of autophagy in mycobacteria infected macrophages

Expression of Bcl-2 family protein, Bfl-1/A1 has been found to differ considerably amongst macrophages infected with virulent Mycobacterium tuberculosis H37Rv or with avirulent M. tuberculosis H37Ra. Present work was undertaken to deduce the significance of differential expression of Bfl-1/A1 in the outcome of mycobacterial infection. We have studied the role of Bfl-1/A1 particularly in autophagy formation in tubercle bacilli infected cells since autophagy has been recognized as a component of innate immunity against pathogenic mycobacteria. First, we have confirmed that upon infection virulent strain H37Rv retain Bfl-1/A1 for longer period and impose autophagosome maturation block within infected cells as evident from confocal microscopy. Moreover, down regulation of Bfl-1/A1 by siRNA induced autophagy formation and reduced bacterial growth. Furthermore, even the avirulent strain H37Ra resist autophagosome maturation and survive if the cellular level of Bfl-1 is maintained in THP-1 cells by stable transfection (Bfl-1 overexpressing cells). No noteworthy difference in mTOR expression was observed between normal THP-1 and Bfl-1 overexpressing THP-1 cells infected with either strain of mycobacteria. Interestingly, we found that not only mTOR but also Bfl-1/A1 is involved in rapamycin induced autophagy in mycobacteria infected macrophages. We have found that Bfl-1 physically interacts with Beclin 1 in Bfl-1 overexpressing THP-1 as well as in H37Rv infected THP-1 cells as they co-precipitated. Taken together, our results clearly demonstrated that Bfl-1/A1 negatively regulates autophagy and expression of Bfl-1/A1 in H37Rv infected macrophages provides the bacteria a survival strategy to overcome host defense.     

A novel disulfide-rich protein motif from avian eggshell membranes

Under the shell of a chicken egg are two opposed proteinaceous disulfide-rich membranes. They are fabricated in the avian oviduct using fibers formed from proteins that are extensively coupled by irreversible lysine-derived crosslinks. The intractability of these eggshell membranes (ESM) has slowed their characterization and their protein composition remains uncertain. In this work, reductive alkylation of ESM followed by proteolytic digestion led to the identification of a cysteine rich ESM protein (abbreviated CREMP) that was similar to spore coat protein SP75 from cellular slime molds. Analysis of the cysteine repeats in partial sequences of CREMP reveals runs of remarkably repetitive patterns. Module a contains a C-X(4)-C-X(5)-C-X(8)-C-X(6) pattern (where X represents intervening non-cysteine residues). These inter-cysteine amino acid residues are also strikingly conserved. The evolutionarily-related module b has the same cysteine spacing as a, but has 11 amino acid residues at its C-terminus. Different stretches of CREMP sequences in chicken genomic DNA fragments show diverse repeat patterns: e.g. all a modules; an alternation of a-b modules; or an a-b-b arrangement. Comparable CREMP proteins are found in contigs of the zebra finch (Taeniopygia guttata) and in the oviparous green anole lizard (Anolis carolinensis). In all these cases the long runs of highly conserved modular repeats have evidently led to difficulties in the assembly of full length DNA sequences. Hence the number, and the amino acid lengths, of CREMP proteins are currently unknown. A 118 amino acid fragment (representing an a-b-a-b pattern) from a chicken oviduct EST library expressed in Escherichia coli is a well folded, highly anisotropic, protein with a large chemical shift dispersion in 2D solution NMR spectra. Structure is completely lost on reduction of the 8 disulfide bonds of this protein fragment. Finally, solid state NMR spectra suggest a surprising degree of order in intact ESM fibers.     

亚热带森林乔木树种DNA条形码研究——以哀牢山自然保护区为例

作为新一代植物志iFlora的重要组成部分,DNA条形码已经成为物种鉴定中重要且有效的方法。本研究以亚热带森林的乔木树种为研究对象,开展了DNA条形码的尝试性工作。为评估DNA条形码对鉴定亚热带森林树种的有效性,收集并研究了来自哀牢山自然保护区内5l科111属中204个树种的525个乔木个体。结果显示,所选4个DNA片段（rbcL,matK,trnH-psbA和ITS）的PCR扩增成功率都超过90％;测序成功率rbcL和matK最高,分别为90．7％和90．5％,trnH-psbA次之（83．6％）,ITS最低（73．5％）,表明4个片段在亚热带森林乔木中都具有较好的通用性。应用BLAST与NJ Tree两种方法,对物种和属水平的鉴别成功率进行统计,发现单片段中ITS最高,分别为68．4％-81．3％和99．0％～100％,核心条码rkL和matK组合的成功率是52．8％～60．2％和86．7％～90．5％,再与补充条码trnH-psbA和ITS联合,可以成功鉴别74．7％～79．6％哀牢山自然保护区亚热带森林中的乔木物种。由于ITS片段在亚热带森林部分重要树种类群（樟科和壳斗科等）中的测序成功率较差,所以对这些植物类群采用trnH-psbA作为DNA条形码是一个更好的选择。     

干旱与盐胁迫对花生根际土壤细菌群落结构和花生产量的影响

以花生品种花育25号为试验材料,采用盆栽试验研究了开花期干旱和盐分胁迫对花生生长发育和荚果产量的影响,并运用高通量测序技术分析干旱、盐胁迫及旱盐双重胁迫下,花生根际土壤细菌群落结构的变化特征。结果表明: 不同胁迫处理花生根际土壤细菌群落均以变形菌门、放线菌门、Saccharibacteria、绿弯菌门、蓝藻菌门和酸杆菌门为主。干旱、盐胁迫及旱盐双重胁迫均不同程度降低了变形菌门和放线菌门的相对丰度,但显著提高了蓝藻菌门的含量,且旱盐双重胁迫较其单一胁迫引起的根际蓝藻菌门丰度变化更显著。土壤细菌功能预测分析显示,信号转导机制、防御机制及翻译后修饰、蛋白质周转和分子伴侣等相关功能在旱盐双重胁迫的细菌中活性更强,可能对花生生长及胁迫应答具有重要影响。统计学分析显示,开花期干旱、盐胁迫和旱盐双重胁迫严重影响花生生长发育,并显著降低产量。研究结果可为通过改良土壤微生物环境来提高植物胁迫耐受性提供参考。     

Neutrophilic phagocytosis by tumor cells. A feature to consider in the differential diagnosis in fine needle aspiration smears

OBJECTIVE: To analyze neutrophilic phagocytosis by tumor cells in fine needle aspirate (FNA) smears from different types of tumor. STUDY DESIGN: A retrospective review of a total of 7 cases showing prominent neutrophilic phagocytosis by tumor cells in FNA smears during the period July 2003-December 2004. RESULTS: This feature was seen in malignant fibrous histiocytoma and poorly differentiated renal cell carcinoma in addition to giant cell carcinoma of the lung. CONCLUSION: Neutrophilic phagocytosis by tumor cells is seen in FNA smears and on cytomorphology. The differential diagnoses should include both pleomorphic sarcomas and carcinomas.     

Identification and association of ISSR markers for thermal stress in polyvoltine silkworm <Emphasis Type="Italic">Bombyx mori</Emphasis>

Evaluation of genetic resources is an essential prerequisite for their effective utilization. In India, the tropical climate prevails in most of the sericultural belts, where temperature goes beyond the ambient during summer, adversely affecting the silkworm rearing. Although polyvoltine silkworms are poor in silk content, they are mostly tolerant to tropical conditions and diseases. With an aim to identify potential silkworm races/breeds specific to thermotolerance for their effective utilization in breeding programme, 15 selected polyvoltine silkworm races were studied for their thermotolerance behaviour. Their genomic DNA samples were analyzed for ISSR-PCR using 15 selected primers. The UPGMA analysis based on Nei and Li algorithm has clustered the 15 silkworm races into five groups and one isolate. ALSCAL multidimensional scaling has not only supported the information generated by the dendrogram, but it has made the genetic distance among races more clear and substantiating their status in terms of thermal stress where pupation rate was taken as indicator. Further, discriminant function analysis (DFA) was done with three groups of silkworms classified for thermal stress viz. susceptible, moderately tolerant and tolerant. The canonical correlation value was estimated to be 0.987 (Wilk’s λ= 0.004; χ² = 36.044, p < 0.05). DFA clearly discriminated the above three groups. Beta statistics with t value and its significance for the markers identified through stepwise multiple regression analysis (MRA) revealed a total of five bands (807₁₃₀₀, 808₃₀₀₀, 808₄₀₀₀, 834₄₀₀₀, and 834₃₀₀₀) showing correlation with pupation rate after thermal treatment. Out of them, marker 808 3000 showed maximum and highly significant correlation (r = 0.757, p < 0.001, t = 4.182) with pupation rate among the silkworm races. The identified putative markers are being used to develop DNA marker to be used in evolving thermo-tolerant silkworm breeds using marker-assisted selection programme. The text was submitted by the authors in English.